Diffusion Preproc

caps.diffusion_preproc: User Guide

Some live exemples containing useful snippet of codes.

fsl_preproc.pilot	FSL diffusion preprocessings
bet.pilot	Diffusion Brain Extraction Tool

caps.diffusion_preproc: API

The exact API of all functions and classes, as given by the docstrings. For the user guide see the diffusion_preproc_ug section for further details.

Pipelines

bet.dBET	Diffusion FSL Brain Extraction Tool (BET).
fsl_preproc.FslDiffsuionPpreprocessings	FSL diffusion preprocessings
susceptibility_correction.SusceptibilityCorrection	FSL suceptibility correction

Buildingblocks

bet.ExtractReferenceB0Image	Extract the first reference (b=0) image from a diffusion timeserie
eddy_correction.EddyCorrection	FSL eddy distortion correction
motion_correction.TimeSerieMotionCorrection	FSL rigid registration of a time serie sequence to a reference volume