This documentation is for CAPS version 0.0.1

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caps.diffusion_preproc.eddy_correction.EddyCorrection

EddyCorrection

class caps.diffusion_preproc.eddy_correction.EddyCorrection[source]

FSL eddy distortion correction

For complete details on the registration algorithm, see the FLIRT Documentation.

Inputs

[Mandatory]

in_files: a legal value (mandatory)
a serie of images to correct
reference_file: a file name (mandatory)
the reference image

[Optional]

output_directory: a directory name (optional)
the output directory

Outputs

affine_transformations: a legal value
path of the calculated rigid transformations
eddy_corrected_files: a legal value
path of the registered images