neurom.view.view.plot_neuron3d¶
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neurom.view.view.
plot_neuron3d
(ax, nrn, diameter_scale=1.0, linewidth=1.2, color=None, alpha=0.8)[source]¶ Generates a figure of the neuron, that contains a soma and a list of trees.
Parameters: - ax (matplotlib axes) – on what to plot
- nrn (neuron) – neuron to be plotted
- diameter_scale (float) – Scale factor multiplied with segment diameters before plotting
- linewidth (float) – all segments are plotted with this width, but only if diameter_scale=None
- color (str or None) – Color of plotted values, None corresponds to default choice
- alpha (float) – Transparency of plotted values