neurom.check.structural_checksΒΆ
Module with consistency/validity checks for raw data blocks
Functions
has_all_finite_radius_neurites |
Check that all points with neurite type have a finite radius |
has_increasing_ids |
Check that IDs are increasing |
has_sequential_ids |
Check that IDs are increasing and consecutive |
has_soma_points |
Checks if the TYPE column of raw data block has an element of type soma |
has_valid_neurites |
Check if any neurites can be reconstructed from data block |
has_valid_soma |
Check if a data block has a valid soma |
is_single_tree |
Check that data forms a single tree |
no_missing_parents |
Check that all points have existing parents Point’s parent ID must exist and parent must be declared before child. |