neurom.io.hdf5

Module for morphology HDF5 data loading

Data is unpacked into a 2-dimensional raw data block:

[X, Y, Z, R, TYPE, ID, PARENT_ID]

HDF5.V1 Input row format:

points: [X, Y, Z, D] (ID is position) groups: [FIRST_POINT_ID, TYPE, PARENT_GROUP_ID]

There is one such row per measured point.

Functions

get_version	Determine whether an HDF5 file is v1 or v2
read	Read a file and return a data_wrapper’d data