caps.diffusion_registration.fsl_registration.FSLRegistration¶

FSLRegistration¶

class caps.diffusion_registration.fsl_registration.FSLRegistration(autoexport_nodes_parameters=True, **kwargs)[source]¶: FSL non linear registration to a template

[Mandatory]

fa_file: a file name (mandatory)

input file

target_file: a file name (mandatory)

reference file

tensor_file: a file name (mandatory)

image to be warped

[Optional]

config_file: a legal value or a file name (optional)

Name of config file specifying command line arguments

mask_file: a file name (optional)

File for input weighting volume

fa_warped_file: a file name

warped image

field_file: a file name

file with warp field

fieldcoeff_file: a file name

file with field coefficients

reoriented_tensor_file: a file name

the reoriented tensor field

tensor_warped_file: a file name

Warped output file