TASSELpy.net.maizegenetics.analysis.data package

Submodules

TASSELpy.net.maizegenetics.analysis.data.IntersectionAlignmentPlugin module

class TASSELpy.net.maizegenetics.analysis.data.IntersectionAlignmentPlugin.IntersectionAlignmentPlugin(*args, **kwargs)[source]

Bases: TASSELpy.net.maizegenetics.analysis.data.UnionAlignmentPlugin.UnionAlignmentPlugin

Methods

castTo(pyType) Casts this object to another java/python type
clone(*args) Creates and returns a copy of this object
equals(*args) Indicates whether some other object is “equal to” this one
getArray(size) Gets an empty wrapped java array that can accept the type of the wrapped
getCitation(*args) Returns Citation for this plugin
getClass(*args) Returns the runtime class of this Object.
getDblArray(rows[, cols]) Gets an empty wrapped java array that can accept the type of other wrapped java arrays: i.e.
getInputs(*args) Gets list of inputs
getParameter(*args) Returns a parameter value for given parameter key
hashCode(*args) Returns a hash code vlaue for the object
isInteractive(*args) If interactive == true, the plugin will create dialgos and panels
performFunction(*args) Performs the function of this plugin
pluginDescription(*args) Returns description of the plugin
processData(*args) For the new Generic plugin parameter design, performFunction() will automatically call this.
receiveInput(*args) Sets up this plugin to receive input from another plugin
setParameter(*args) Sets parameter value
setParameters(*args) Allows self-describing Plugins to use args to set parameters specific
toString(*args) Returns a string representation of the object
wrap_existing_array(arr_instance) Wraps a java array of this class’s type
__init__(*args, **kwargs)[source]

Creates a new instance of IntersectionAlignmentPlugin

Signature:

IntersectionAlignmentPlugin (Frame parentFrame, boolean isInteractive)

Parameters:
  • parentFrame (Frame) – A frame, can be null
  • isInteractive (boolean) – Whether in an interactive session

TASSELpy.net.maizegenetics.analysis.data.UnionAlignmentPlugin module

class TASSELpy.net.maizegenetics.analysis.data.UnionAlignmentPlugin.UnionAlignmentPlugin(*args, **kwargs)[source]

Bases: TASSELpy.net.maizegenetics.plugindef.AbstractPlugin.AbstractPlugin

Methods

castTo(pyType) Casts this object to another java/python type
clone(*args) Creates and returns a copy of this object
equals(*args) Indicates whether some other object is “equal to” this one
getArray(size) Gets an empty wrapped java array that can accept the type of the wrapped
getCitation(*args) Returns Citation for this plugin
getClass(*args) Returns the runtime class of this Object.
getDblArray(rows[, cols]) Gets an empty wrapped java array that can accept the type of other wrapped java arrays: i.e.
getInputs(*args) Gets list of inputs
getParameter(*args) Returns a parameter value for given parameter key
hashCode(*args) Returns a hash code vlaue for the object
isInteractive(*args) If interactive == true, the plugin will create dialgos and panels
performFunction(*args) Performs the function of this plugin
pluginDescription(*args) Returns description of the plugin
processData(*args) For the new Generic plugin parameter design, performFunction() will automatically call this.
receiveInput(*args) Sets up this plugin to receive input from another plugin
setParameter(*args) Sets parameter value
setParameters(*args) Allows self-describing Plugins to use args to set parameters specific
toString(*args) Returns a string representation of the object
wrap_existing_array(arr_instance) Wraps a java array of this class’s type
__init__(*args, **kwargs)[source]

Creates a new instance of UnionAlignmentPlugin

Signature:

UnionAlignmentPlugin (Frame parentFrame, boolean isInteractive)

Parameters:
  • parentFrame (Frame) – A frame, can be null
  • isInteractive (boolean) – Whether in an interactive session

Module contents