1. Whats’ new, what has changed

1.1. Revision 0.2

• 0.2.11:

  • add a RPackageManager

• 0.2.10:

  • add proper logging in package module
  • package.install_package function can install source package, R source dircectory, CRAN package, URL tar ball
  • package.biocLite improvement
  • some cleanup in package.RPackage module

• 0.2.9: improve robustness of the setAttributes function that recursively set attributes

• 0.2.8:

  • add install_packages() function to install package from URL (or local)
  • Fix typo in __init__ that raise an error systematically
  • biocLite: add doc, and remove update by default

• 0.2.7: add rtools.package.biocLite() function to install a package automatically.

• 0.2.6: make module colormap optional in the __init__ to prevent error if pylab not installed.

• 0.2.4: add rtools.plots module.

• 0.2.3: add list into the convertor.

• 0.2.2: add simple S4Class in s4 module (+test+doc). Update tutorial to add rcode, Rpackage, S4class examples.

• 0.2.1: finalising documentation, and tests. Add rcode function in tools.

• 0.2.0: add rtools.error module, rtools.package modules

1.2. Revision 0.1

• 0.1.0: add Colormap class to convert R colormap to matplotlib colormap