TASSELpy Tutorial

Contents:

• Starting and stopping TASSELpy
  • Starting the JVM
  • Stopping the JVM
• Running Java through Python
  • Importing and Instantiating a Class
  • Getting help
  • Argument Types
  • Making Java Arrays
  • Java Generics
• Loading and Manipulating GenotypeTables
  • Loading genetic polymorphism data
  • Using the GenotypeTable
  • Filtering the GenotypeTable
• Running Quantitative Genetic Analyses
  • Running the GLM