All modules for which code is available

• TASSELpy.TASSELbridge
• TASSELpy.java.lang.Boolean
• TASSELpy.java.lang.Byte
• TASSELpy.java.lang.Comparable
• TASSELpy.java.lang.Double
• TASSELpy.java.lang.Enum
• TASSELpy.java.lang.Float
• TASSELpy.java.lang.Integer
• TASSELpy.java.lang.Iterable
• TASSELpy.java.lang.Long
• TASSELpy.java.lang.Number
• TASSELpy.java.lang.Object
• TASSELpy.java.lang.Runnable
• TASSELpy.java.lang.String
• TASSELpy.java.lang.Thread
• TASSELpy.java.lang.reflect.Array
• TASSELpy.java.util.AbstractMap
• TASSELpy.java.util.AbstractSequentialList
• TASSELpy.java.util.ArrayList
• TASSELpy.java.util.Collection
• TASSELpy.java.util.Deque
• TASSELpy.java.util.FilterList
• TASSELpy.java.util.HashMap
• TASSELpy.java.util.Iterator
• TASSELpy.java.util.LinkedList
• TASSELpy.java.util.List
• TASSELpy.java.util.ListIterator
• TASSELpy.java.util.Map
• TASSELpy.java.util.Queue
• TASSELpy.java.util.Set
• TASSELpy.javaObj
• TASSELpy.net.maizegenetics.analysis.association.FixedEffectLMPlugin
• TASSELpy.net.maizegenetics.analysis.data.IntersectionAlignmentPlugin
• TASSELpy.net.maizegenetics.analysis.data.UnionAlignmentPlugin
• TASSELpy.net.maizegenetics.analysis.distance.IBSDistanceMatrix
• TASSELpy.net.maizegenetics.analysis.distance.Kinship
• TASSELpy.net.maizegenetics.analysis.popgen.LDResult
• TASSELpy.net.maizegenetics.analysis.popgen.LinkageDisequilibrium
• TASSELpy.net.maizegenetics.dna.map.Chromosome
• TASSELpy.net.maizegenetics.dna.map.Position
• TASSELpy.net.maizegenetics.dna.map.PositionList
• TASSELpy.net.maizegenetics.dna.snp.CoreGenotypeTable
• TASSELpy.net.maizegenetics.dna.snp.FilterGenotypeTable
• TASSELpy.net.maizegenetics.dna.snp.GenotypeTable
• TASSELpy.net.maizegenetics.dna.snp.GenotypeTableUtils
• TASSELpy.net.maizegenetics.dna.snp.ImportUtils
• TASSELpy.net.maizegenetics.dna.snp.byte2d.Byte2D
• TASSELpy.net.maizegenetics.dna.snp.depth.AlleleDepth
• TASSELpy.net.maizegenetics.dna.snp.genotypecall.AbstractGenotypeCallTable
• TASSELpy.net.maizegenetics.dna.snp.genotypecall.GenotypeCallTable
• TASSELpy.net.maizegenetics.dna.snp.genotypecall.GenotypeMergeRule
• TASSELpy.net.maizegenetics.dna.snp.score.AlleleProbability
• TASSELpy.net.maizegenetics.dna.snp.score.Dosage
• TASSELpy.net.maizegenetics.dna.snp.score.ReferenceProbability
• TASSELpy.net.maizegenetics.dna.snp.score.SiteScore
• TASSELpy.net.maizegenetics.matrixalgebra.Matrix.DoubleMatrix
• TASSELpy.net.maizegenetics.matrixalgebra.Matrix.DoubleMatrixFactory
• TASSELpy.net.maizegenetics.matrixalgebra.decomposition.EigenvalueDecomposition
• TASSELpy.net.maizegenetics.matrixalgebra.decomposition.SingularValueDecomposition
• TASSELpy.net.maizegenetics.plugindef.AbstractPlugin
• TASSELpy.net.maizegenetics.plugindef.Datum
• TASSELpy.net.maizegenetics.plugindef.Plugin
• TASSELpy.net.maizegenetics.plugindef.PluginParameter
• TASSELpy.net.maizegenetics.stats.statistics.FisherExact
• TASSELpy.net.maizegenetics.taxa.TaxaList
• TASSELpy.net.maizegenetics.taxa.TaxaListBuilder
• TASSELpy.net.maizegenetics.taxa.Taxon
• TASSELpy.net.maizegenetics.taxa.distance.DistanceMatrix
• TASSELpy.net.maizegenetics.taxa.distance.TaxaListMatrix
• TASSELpy.net.maizegenetics.trait.AbstractPhenotype
• TASSELpy.net.maizegenetics.trait.CombinePhenotype
• TASSELpy.net.maizegenetics.trait.FilterPhenotype
• TASSELpy.net.maizegenetics.trait.MarkerPhenotype
• TASSELpy.net.maizegenetics.trait.MarkerPhenotypeAdapter
• TASSELpy.net.maizegenetics.trait.Phenotype
• TASSELpy.net.maizegenetics.trait.ReadPhenotypeUtils
• TASSELpy.net.maizegenetics.trait.SimplePhenotype
• TASSELpy.net.maizegenetics.trait.Trait
• TASSELpy.net.maizegenetics.util.BitSet
• TASSELpy.net.maizegenetics.util.GeneralAnnotation
• TASSELpy.net.maizegenetics.util.GeneralAnnotationStorage
• TASSELpy.net.maizegenetics.util.OpenBitSet
• TASSELpy.net.maizegenetics.util.ProgressListener
• TASSELpy.net.maizegenetics.util.TableReport
• TASSELpy.net.maizegenetics.util.UnmodifiableBitSet
• TASSELpy.test.java.lang.BooleanTest
• TASSELpy.test.java.lang.ByteTest
• TASSELpy.test.java.lang.DoubleTest
• TASSELpy.test.java.lang.FloatTest
• TASSELpy.test.java.lang.IntegerTest
• TASSELpy.test.java.lang.LongTest
• TASSELpy.test.java.lang.langTestSuite
• TASSELpy.test.java.util.MapTest
• TASSELpy.test.java.util.utilTestSuite
• TASSELpy.test.javaObjTest
• TASSELpy.test.mainTestSuite
• TASSELpy.test.net.maizegenetics.analysis.IBSDistanceMatrixTest
• TASSELpy.test.net.maizegenetics.analysis.analysisTestSuite
• TASSELpy.test.net.maizegenetics.analysis.association.FixedEffectLMPlugin
• TASSELpy.test.net.maizegenetics.analysis.association.associationTestSuite
• TASSELpy.test.net.maizegenetics.analysis.distance.KinshipTest
• TASSELpy.test.net.maizegenetics.analysis.distance.distanceTestSuite
• TASSELpy.test.net.maizegenetics.analysis.popgen.LDResultTest
• TASSELpy.test.net.maizegenetics.analysis.popgen.LinkageDisequilibriumTest
• TASSELpy.test.net.maizegenetics.analysis.popgen.popgenTestSuite
• TASSELpy.test.net.maizegenetics.dna.snp.GenotypeTableTest
• TASSELpy.test.net.maizegenetics.dna.snp.snpTestSuite
• TASSELpy.test.net.maizegenetics.matrixalgebra.Matrix.DoubleMatrixFactoryTest
• TASSELpy.test.net.maizegenetics.matrixalgebra.Matrix.DoubleMatrixTest
• TASSELpy.test.net.maizegenetics.matrixalgebra.Matrix.MatrixTestSuite
• TASSELpy.test.net.maizegenetics.matrixalgebra.decomposition.EigenvalueDecompositionTest
• TASSELpy.test.net.maizegenetics.matrixalgebra.decomposition.SingularValueDecompositionTest
• TASSELpy.test.net.maizegenetics.matrixalgebra.decomposition.decompositionTestSuite
• TASSELpy.test.net.maizegenetics.stats.statistics.FisherExactTest
• TASSELpy.test.net.maizegenetics.stats.statistics.statisticsTestSuite
• TASSELpy.test.net.maizegenetics.taxa.TaxaListBuilderTest
• TASSELpy.test.net.maizegenetics.taxa.TaxaListTest
• TASSELpy.test.net.maizegenetics.taxa.TaxonTest
• TASSELpy.test.net.maizegenetics.taxa.distance.DistanceMatrixTest
• TASSELpy.test.net.maizegenetics.taxa.distance.TaxaListMatrixTest
• TASSELpy.test.net.maizegenetics.taxa.distance.distanceTestSuite
• TASSELpy.test.net.maizegenetics.taxa.taxaTestSuite
• TASSELpy.test.net.maizegenetics.trait.MarkerPhenotypeTest
• TASSELpy.test.net.maizegenetics.trait.PhenotypeTest
• TASSELpy.test.net.maizegenetics.trait.TraitTest
• TASSELpy.test.net.maizegenetics.trait.traitTestSuite
• TASSELpy.test.net.maizegenetics.util.TableReportTest
• TASSELpy.test.net.maizegenetics.util.utilTestSuite
• TASSELpy.test.utils.cachingTest
• TASSELpy.test.utils.primativeArrayTest
• TASSELpy.test.utils.utilsTestSuite
• TASSELpy.utils.DocInherit
• TASSELpy.utils.OrderedSet
• TASSELpy.utils.Overloading
• TASSELpy.utils.caching
• TASSELpy.utils.helper
• TASSELpy.utils.primativeArray