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RHESSysCalibrator
2.1.0
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A system for managing calibration sessions and run of RHESSys. More...
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| tuple | RHESSysCalibrator = RHESSysCalibrator() |
A system for managing calibration sessions and run of RHESSys.
Can by run on laptop/workstation using multiple processors or on a cluster that runs LSF (by Platform Computing, Inc.) for job management.
This software is provided free of charge under the New BSD License. Please see the following license information:
Copyright (c) 2013, University of North Carolina at Chapel Hill All rights reserved.
Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met:
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE UNIVERSITY OF NORTH CAROLINA AT CHAPEL HILL BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
Revisions: 20110606: fixed queue IPC implementation, refactored CalibrationRunner class and descendants 20110626: 1.0.3: refactored CalibrationRunner to ModelRunner for generalization only update accounting of active jobs after verifying that job returned by bjobs belongs to us (is in current session record) 20110628: fixed bug where –create option required iterations and jobs options to be specified 20110710: 1.0.4: Added subprocess parallelization method; Removed pipe-based IPC method. 20120105: 1.0.5: Added support for running RHESSys in TOPMODEL model (i.e. no flow tables); Added support for using the same calibration parameters for both horizontal and vertical m parameter Changed LSF queues to reflect those on KillDevil 20120114: 1.0.6: Added support for running bsub with exclusive mode parameter Removed old PIPE-based CalibrationRunner implementation 20120215: 1.0.7: Updated –use_horizontal_m_for_vertical to apply also to the K parameter (new option is –use_horizontal_m_and_K_for_vertical) 20120327: 1.0.8: Added support for vgsen and svalt calibration parameters 20120328: 1.0.9: Fixed bug where third -s parameter was not set by CalibrationParameters 20120529: 1.0.10: Added filter for worldfile lookup that excludes redefine worldfiles.
1.8.10