interfaces.semtools.legacy.registration

scalartransform

Link to code

Wraps command ** scalartransform **

title: ScalarTransform (DTIProcess)

category: Legacy.Registration

version: 1.0.0

documentation-url: http://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/DTIProcess

license: Copyright (c) Casey Goodlett. All rights reserved.

See http://www.ia.unc.edu/dev/Copyright.htm for details.

This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the above copyright notices for more information.

contributor: Casey Goodlett

Inputs:

[Mandatory]

[Optional]
args: (a unicode string)
        Additional parameters to the command
        flag: %s
deformation: (an existing file name)
        Deformation field.
        flag: --deformation %s
environ: (a dictionary with keys which are a newbytes or None or a
         newstr or None and with values which are a newbytes or None or a
         newstr or None, nipype default value: {})
        Environment variables
h_field: (a boolean)
        The deformation is an h-field.
        flag: --h_field
ignore_exception: (a boolean, nipype default value: False)
        Print an error message instead of throwing an exception in case the
        interface fails to run
input_image: (an existing file name)
        Image to tranform
        flag: --input_image %s
interpolation: ('nearestneighbor' or 'linear' or 'cubic')
        Interpolation type (nearestneighbor, linear, cubic)
        flag: --interpolation %s
invert: (a boolean)
        Invert tranform before applying.
        flag: --invert
output_image: (a boolean or a file name)
        The transformed image
        flag: --output_image %s
terminal_output: (u'stream' or u'allatonce' or u'file' or u'none')
        Control terminal output: `stream` - displays to terminal immediately
        (default), `allatonce` - waits till command is finished to display
        output, `file` - writes output to file, `none` - output is ignored
transformation: (a boolean or a file name)
        Output file for transformation parameters
        flag: --transformation %s

Outputs:

output_image: (an existing file name)
        The transformed image
transformation: (an existing file name)
        Output file for transformation parameters