Index

Symbols | B | C | D | E | F | G | I | J | L | M | N | O | P | R | S | T

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Symbols

@check_if_uptodate @files @files_re @follows mkdir

@parallel @posttask touch_file

B

break

C

check_if_uptodate (class in ruffus.task) cleanup

D

decorator dynamic parameters

E

errors Example Programme 1. Simple 2. Intermediate 3. Ambitious 4. Sharing data across parallel jobs Example Programme Code 1. Simple 2. Intermediate 3. Ambitious 4. Sharing data across parallel jobs

exceptions

F

file_list_io_param_factory() (in module ruffus.task) files (class in ruffus.task) files_re (class in ruffus.task)

follows (class in ruffus.task)

G

generator glob_regex_io_param_factory() (in module ruffus.task)

I

interrupts

J

job job_wrapper_generic() (in module ruffus.task) job_wrapper_io_files() (in module ruffus.task)

job_wrapper_mkdir() (in module ruffus.task)

L

logging

M

make_shared_logger_and_proxy() (in module ruffus.proxy_logger) mkdir @follows

N

needs_update_check_directory_missing() (in module ruffus.task) needs_update_check_modify_time() (in module ruffus.task)

O

on the fly parameters

P

parallel (class in ruffus.task) parameters dynamic on the fly pipeline_printout() (in module ruffus.task)

pipeline_printout_graph() (in module ruffus.task) pipeline_run() (in module ruffus.task) posttask (class in ruffus.task) precision

R

resolution ruffus.proxy_logger (module)

ruffus.task (module)

S

setup_std_shared_logger() (in module ruffus.proxy_logger) signalling

T

t_black_hole_logger (class in ruffus.task) t_stderr_logger (class in ruffus.task) task timestamp

touch_file @posttask