Prerequisites / Installation

odML-tables is a pure Python package so that it should be easy to install on any system.

Dependencies

The following packages are required to use python-odmltables:

  • Python_ >= 2.7

  • numpy_ >= 1.8.2

  • quantities_ >= 0.10.1

  • odml >= 1.1

  • xlrd >= 0.9.4

  • xlwt >= 1.0.0

  • For building the documentation:
    • numpydoc >= 0.5
    • sphinx >= 1.2.2
  • For running tests:
    • nose >= 1.3.3

Download

The latest version of python-odmltables is available on [GitHub] (https://github.com/INM-6/python-odmltables). You can either use git and download python-odmltables directly under Linux using

$ cd /home/usr/toolbox/ $ git clone https://github.com/INM-6/python-odmltables.git

or alternatively download python-odmltables as ZIP file and unzip it to a folder.

Installation

Linux

On Linux, to set up python-odmltables you navigate to your python-odmltables folder and install it via

$ cd /home/usr/toolbox/python-odmltables/ $ python setup.py install

You can start the odmltables graphical wizard by calling

odml-tables

Alternatively, you may navigate to the python-odmltables folder and run

./odmltables-gui

Windows/Mac OS X

On non-Linux operating systems we recommend using the Anaconda Python distribution, and installing all dependencies in a Conda environment, e.g.:

$ conda create -n neuroscience python numpy scipy pip six
$ source activate neuroscience

Then navigate to the folder where you downloaded python-odmltables and run:

$ python setup.py install

On Windows, to run the graphical wizard, execute odml-tables.exe in the Anaconda/Envs/neuroscience/Scripts folder in your User directory.

Alternatively, on Windows or Max OS X you may navigate to the python-odmltables folder and run

python odmltables-gui.py

Bugs

If you observe a bug in odMLtables please add a bug report at [the github bug tracker] (https://github.com/INM-6/python-odmltables/issues)