Bases: builtins.object
Implements the GOR III secondary structure prediction algorithm.
Objects of this class must be trained with known examples of sequences and their structure
before being able to predict the structures of new sequences.
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__init__()[source]
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getQuality()[source]
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getStructures(exclude=None)[source]
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neighbourOffsets()[source]
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neighbourValues(sequence, index)[source]
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plotROC()[source]
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predict(sequence, realStructure=None)[source]
Returns the predicted structure of ‘sequence’, based on received training.
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train(sequence, structure)[source]
Trains the system with a known example of a sequence and its structure.