API

This module illustrates how to write your docstring in OpenAlea and other projects related to OpenAlea.

class research_tryouts.docstring_sample.MainClass1

This class docstring shows how to use sphinx and rst syntax

The first line is brief explanation, which may be completed with a longer one. For instance to discuss about its methods. The only method here is function1()‘s. The main idea is to document the class and methods’s arguments with

  • parameters, types, return and return types:

    :param arg1: description
    :param arg2: description
    :type arg1: type description
    :type arg1: type description
    :return: return description
    :rtype: the return type description
    
  • and to provide sections such as Example using the double commas syntax:

    :Example:
    
    followed by a blank line !
    

    which appears as follow:

    Example:

    followed by a blank line

  • Finally special sections such as See Also, Warnings, Notes use the sphinx syntax (paragraph directives):

    .. seealso:: blabla
    .. warnings also:: blabla
    .. note:: blabla
    .. todo:: blabla
    

Note

There are many other Info fields but they may be redundant:
  • param, parameter, arg, argument, key, keyword: Description of a parameter.
  • type: Type of a parameter.
  • raises, raise, except, exception: That (and when) a specific exception is raised.
  • var, ivar, cvar: Description of a variable.
  • returns, return: Description of the return value.
  • rtype: Return type.

Note

There are many other directives such as versionadded, versionchanged, rubric, centered, ... See the sphinx documentation for more details.

Here below is the results of the function1() docstring.

function1(arg1, arg2, arg3)

returns (arg1 / arg2) + arg3

This is a longer explanation, which may include math with latex syntax . Then, you need to provide optional subsection in this order (just to be consistent and have a uniform documentation. Nothing prevent you to switch the order):

  • parameters using :param <name>: <description>
  • type of the parameters :type <name>: <description>
  • returns using :returns: <description>
  • examples (doctest)
  • seealso using .. seealso:: text
  • notes using .. note:: text
  • warning using .. warning:: text
  • todo .. todo:: text
Advantages:
  • Uses sphinx markups, which will certainly be improved in future version
  • Nice HTML output with the See Also, Note, Warnings directives
Drawbacks:
  • Just looking at the docstring, the parameter, type and return sections do not appear nicely
Parameters:
  • arg1 (int, float,...) – the first value
  • arg2 (int, float,...) – the first value
  • arg3 (int, float,...) – the first value
Returns:

arg1/arg2 +arg3

Return type:

int, float

Example:
>>> import template
>>> a = template.MainClass1()
>>> a.function1(1,1,1)
2

Note

can be useful to emphasize important feature

See also

MainClass2

Warning

arg2 must be non-zero.