.. contents::


Data Structures
================

IO
-----


CNOGraph
~~~~~~~~~~~
.. automodule:: cno.io.cnograph
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    :synopsis: 

XCNOGraph
~~~~~~~~~~~
.. automodule:: cno.io.xcnograph
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    :undoc-members:
    :synopsis: 

MIDAS
~~~~~~~
.. automodule:: cno.io.midas
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.. automodule:: cno.io.xmlmidas
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    :synopsis: 

.. automodule:: cno.io.measurements
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    :synopsis: 

Reactions
~~~~~~~~~~~~~~
.. automodule:: cno.io.reactions
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    :undoc-members:
    :synopsis: 

SIF format
~~~~~~~~~~~~~~
.. automodule:: cno.io.sif
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    :synopsis: 

EDA
~~~~~~~~
.. automodule:: cno.io.eda
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    :undoc-members:
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    :synopsis: 


CNA
~~~~~~~~
.. automodule:: cno.io.cna
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    :synopsis: 


Converters
~~~~~~~~~~~~~~~~

.. automodule:: cno.io.adj2sif
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.. automodule:: cno.io.sif2asp
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.. automodule:: cno.io.sop2sif
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    :undoc-members:
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    :synopsis: 


MISC
======

.. automodule:: cno.misc.matfun
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.. automodule:: cno.misc.models
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.. automodule:: cno.misc.tools
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    :undoc-members:
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    :synopsis: 


For developers
===================

.. automodule:: cno.admin.distribute
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    :undoc-members:
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    :synopsis: 

.. automodule:: cno.admin.install
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    :undoc-members:
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