#!/usr/bin/env python
# vim: set fileencoding=utf-8 :
# @author: Manuel Guenther <Manuel.Guenther@idiap.ch>
# @date: Wed Oct 24 10:47:43 CEST 2012
#
# Copyright (C) 2011-2013 Idiap Research Institute, Martigny, Switzerland
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, version 3 of the License.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program. If not, see <http://www.gnu.org/licenses/>.
"""
This file defines simple Client and File interfaces that are comparable with other bob.db databases.
"""
import os
import fileinput
import re
import bob.io.base
import bob.db.base
[docs]class Client(object):
"""
The clients of this database contain ONLY client ids. Nothing special.
"""
def __init__(self, client_id):
self.id = client_id
"""The ID of the client, which is stored as a :py:class:`str` object."""
[docs]class File(bob.db.base.File):
"""
Initialize the File object with the minimum required data.
If the ``model_id`` is not specified, ``model_id`` and ``client_id`` are identical.
If the ``claimed_id`` is not specified, it is expected to be the ``client_id``.
**Parameters**
client_id : various type
The id of the client, this file belongs to.
The type of it is dependent on your implementation.
If you use an SQL database, this should be an SQL type like Integer or String.
path : str
The path of this file, relative to the basic directory.
If you use an SQL database, this should be the SQL type String.
Please do not specify any file extensions.
file_id : various type
The id of the file.
The type of it is dependent on your implementation.
If you use an SQL database, this should be an SQL type like Integer or String.
If you are using an automatically determined file id, you can skip selecting the file id.
"""
def __init__(self, file_name, client_id, model_id=None, claimed_id=None):
self.file_id = file_name # Merged from bob.db.verification.utils
self.client_id = client_id
self.path = file_name
# Note: in case of probe files, model ids are considered to be the ids of the model for the given probe file.
# Hence, there might be several probe files with the same file id, but different model ids.
# Therefore, please DO NOT USE the model_id outside of this class (or the according database queries).
# when the model id is not specified, we use the client id instead
self._model_id = client_id if model_id is None else model_id
# when the claimed id is not specified, we use the client id instead
self.claimed_id = client_id if claimed_id is None else claimed_id
super(File, self).__init__(file_name, file_name)
#############################################################################
### internal access functions for the file lists; do not export!
#############################################################################
class ListReader(object):
def __init__(self, store_lists):
self.m_read_lists = {}
self.m_model_dicts = {}
self.m_store_lists = store_lists
def _read_multi_column_list(self, list_file):
rows = []
if not os.path.isfile(list_file):
raise RuntimeError('File %s does not exist.' % (list_file,))
try:
for line in fileinput.input(list_file):
parsed_line = re.findall('[\w/(-.)]+', line)
if len(parsed_line):
# perform some sanity checks
if len(parsed_line) not in (2, 3, 4):
raise IOError("The read line '%s' from file '%s' could not be parsed successfully!" % (
line.rstrip(), list_file))
if len(rows) and len(rows[0]) != len(parsed_line):
raise IOError(
"The parsed line '%s' from file '%s' has a different number of elements than the first parsed line '%s'!" % (
parsed_line, list_file, rows[0]))
# append the read line
rows.append(parsed_line)
fileinput.close()
except IOError as e:
raise RuntimeError("Error reading the file '%s' : '%s'." % (list_file, e))
# return the read list as a vector of columns
return rows
def _read_column_list(self, list_file, column_count):
# read the list
rows = self._read_multi_column_list(list_file)
# extract the file from the first two columns
file_list = []
for row in rows:
if column_count == 2:
assert len(row) == 2
# we expect: filename client_id
file_list.append(File(file_name=row[0], client_id=row[1]))
elif column_count == 3:
assert len(row) in (2, 3)
# we expect: filename, model_id, client_id
file_list.append(File(file_name=row[0], client_id=row[2] if len(row) > 2 else row[1], model_id=row[1]))
elif column_count == 4:
assert len(row) in (3, 4)
# we expect: filename, model_id, claimed_id, client_id
file_list.append(File(file_name=row[0], client_id=row[3] if len(row) > 3 else row[1], model_id=row[1],
claimed_id=row[2]))
else:
raise ValueError(
"The given column count %d cannot be interpreted. This is a BUG, please report to the author." % column_count)
return file_list
def _create_model_dictionary(self, files):
# remember model ids
retval = {}
for file in files:
if file._model_id not in retval:
retval[file._model_id] = file.client_id
else:
if retval[file._model_id] != file.client_id:
raise ValueError(
"The read model id '%s' is associated to two different client ids '%s' and '%s'!" % (
file._model_id, file.client_id, retval[file._model_id]))
return retval
def read_list(self, list_file, group, type=None):
"""Reads the list of Files from the given list file (if not done yet) and returns it."""
if group in ('world', 'optional_world_1', 'optional_world_2'):
if group not in self.m_read_lists:
# read the world list into memory
list = self._read_column_list(list_file, 2)
if self.m_store_lists:
self.m_read_lists[group] = list
return list
# just return the previously read list
return self.m_read_lists[group]
else:
if group not in self.m_read_lists:
self.m_read_lists[group] = {}
if type not in self.m_read_lists[group]:
if type in ('for_models', 'for_tnorm'):
list = self._read_column_list(list_file, 3)
elif type == 'for_scores':
list = self._read_column_list(list_file, 4)
elif type in ('for_probes', 'for_znorm'):
list = self._read_column_list(list_file, 2)
else:
raise ValueError("The given type must be one of %s, but not '%s'" % (
('for_models', 'for_scores', 'for_probes', 'for_tnorm', 'for_znorm'), type))
if self.m_store_lists:
self.m_read_lists[group][type] = list
return list
return self.m_read_lists[group][type]
def read_models(self, list_file, group, type=None):
"""Generates a dictionary from model_ids to client_ids for the given list file, if not done yet, and returns it"""
assert group in ('dev', 'eval', 'world', 'optional_world_1', 'optional_world_2')
assert type in ('for_models', 'for_tnorm')
if group not in self.m_model_dicts:
self.m_model_dicts[group] = {}
if type not in self.m_model_dicts[group]:
dict = self._create_model_dictionary(self.read_list(list_file, group, type))
if self.m_store_lists:
self.m_model_dicts[group][type] = dict
return dict
return self.m_model_dicts[group][type]