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Metabarcode design and quality assessmentΒΆ

  • ecoPCR: in silico PCR
    • References
    • ecoPCR specific options
    • Output file
    • Examples
    • ecoPCR used sequence attributes
  • ecoPrimers: new barcode markers and primers
    • Reference
    • ecoPrimers specific options
    • Output file
    • Examples
  • ecotaxstat : getting the coverage of an ecoPCR output compared to the original ecoPCR database
    • ecotaxstat specific options
    • Taxonomy related options
    • Common options
  • ecotaxspecificity: Evaluates barcode resolution
    • ecotaxspecificity specific options
    • Taxonomy related options
    • Options to specify input format
    • Common options
    • ecotaxspecificity used sequence attribute

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