Index

A

Abs() (in module ibidas) Add() (in module ibidas) AddEdges() (ibidas.CyNetwork method) Addformat() (in module ibidas) AddNodes() (ibidas.CyNetwork method) AddSlice() (ibidas.representor.Representor method) All() (ibidas.representor.Representor method) (in module ibidas)

And() (in module ibidas) Any() (ibidas.representor.Representor method) (in module ibidas) Argmax() (ibidas.representor.Representor method) (in module ibidas) Argmin() (ibidas.representor.Representor method) (in module ibidas) Argsort() (ibidas.representor.Representor method) (in module ibidas) Argunique() (ibidas.representor.Representor method) Array() (ibidas.representor.Representor method) (in module ibidas)

B

biogrid() (in module ibidas.pre) Bookmark() (ibidas.representor.Representor method)

Broadcast (class in ibidas)

C

Cast() (ibidas.representor.Representor method) Combine (class in ibidas) commonType() (ibidas.itypes.rtypes.Type class method) Connect() (in module ibidas) Contains() (ibidas.representor.Representor method) copy() (ibidas.itypes.rtypes.Type method) Copy() (ibidas.representor.Representor method)

Corr() (in module ibidas) Count() (ibidas.representor.Representor method) (in module ibidas) CreateDiscreteColorMap() (ibidas.CyNetwork method) CreateType() (in module ibidas) CumSum() (ibidas.representor.Representor method) (in module ibidas) CyNetwork (class in ibidas)

D

Depth (ibidas.representor.Representor attribute) Detect() (ibidas.representor.Representor method) Dict() (ibidas.representor.Representor method) Difference() (ibidas.representor.Representor method) DimRename() (ibidas.representor.Representor method)

Dims (ibidas.representor.Representor attribute) DimsUnique (ibidas.representor.Representor attribute) Direct (ibidas.CyNetwork attribute) Divide() (in module ibidas)

E

Each() (ibidas.representor.Representor method) (in module ibidas) EdgeAttributeInfo() (ibidas.CyNetwork method) EdgeAttributes() (ibidas.CyNetwork method) EdgeCount (ibidas.CyNetwork attribute) Edges() (ibidas.CyNetwork method)

Elem() (ibidas.representor.Representor method) Elems() (ibidas.representor.Representor method) Equal() (in module ibidas) Except() (ibidas.representor.Representor method) extract_info() (in module ibidas.pre)

F

Fields() (ibidas.representor.Representor method) file_db() (in module ibidas.pre) Filter() (ibidas.representor.Representor method)

Flat() (ibidas.representor.Representor method) FlatAll() (ibidas.representor.Representor method) FloorDivide() (in module ibidas)

G

Get() (ibidas.representor.Representor method) get_kegg_btit() (in module ibidas.pre) get_kegg_organisms() (in module ibidas.pre) get_kegg_pathway() (in module ibidas.pre) get_kegg_pathways() (in module ibidas.pre) getDescendantTypes() (ibidas.itypes.rtypes.Type class method) GetLayoutNames() (ibidas.CyNetwork method) getName() (ibidas.itypes.rtypes.Type method)

GetRepeatedSliceNames() (ibidas.representor.Representor method) getSubType() (ibidas.itypes.rtypes.Type method) getSubTypeNumber() (ibidas.itypes.rtypes.Type method) go_annotations() (in module ibidas.pre) go_info() (in module ibidas.pre) Greater() (in module ibidas) GreaterEqual() (in module ibidas) GroupBy() (ibidas.representor.Representor method)

H

Harray() (ibidas.representor.Representor method) HArray() (in module ibidas) has_missing (ibidas.itypes.rtypes.Type attribute)

hasMissing() (ibidas.itypes.rtypes.Type method) hasMissingValInfo() (ibidas.itypes.rtypes.Type method) HasPattern() (ibidas.representor.Representor method) (in module ibidas)

I

I (ibidas.representor.Representor attribute) ibidas (module) ibidas.pre (module) Id (ibidas.CyNetwork attribute) Import() (in module ibidas) In() (ibidas.representor.Representor method)

in_memory_db() (in module ibidas.pre) IndexDict() (ibidas.representor.Representor method) Info (ibidas.representor.Representor attribute) Intersect() (ibidas.representor.Representor method) Invert() (in module ibidas) IsMissing() (ibidas.representor.Representor method) (in module ibidas)

J

Join() (ibidas.representor.Representor method)

L

Less() (in module ibidas) LessEqual() (in module ibidas) Level() (ibidas.representor.Representor method) Like() (ibidas.representor.Representor method) (in module ibidas) Load() (in module ibidas)

Log() (ibidas.representor.Representor method) (in module ibidas) Log10() (ibidas.representor.Representor method) (in module ibidas) Log2() (ibidas.representor.Representor method) (in module ibidas) Lower() (ibidas.representor.Representor method) (in module ibidas)

M

Match() (ibidas.representor.Representor method) MatchType() (in module ibidas) Max() (ibidas.representor.Representor method) (in module ibidas) Mean() (ibidas.representor.Representor method) (in module ibidas) Median() (ibidas.representor.Representor method) (in module ibidas)

Merge() (ibidas.representor.Representor method) Min() (ibidas.representor.Representor method) (in module ibidas) Modulo() (in module ibidas) Multiply() (in module ibidas)

N

Name (ibidas.CyNetwork attribute) name (ibidas.itypes.rtypes.Type attribute) Names (ibidas.representor.Representor attribute) Negative() (in module ibidas) NodeAttributeInfo() (ibidas.CyNetwork method)

NodeAttributes() (ibidas.CyNetwork method) NodeCount (ibidas.CyNetwork attribute) Nodes() (ibidas.CyNetwork method) NotEqual() (in module ibidas)

O

omim_disease_parse() (in module ibidas.pre) omim_genemap() (in module ibidas.pre)

Or() (in module ibidas)

P

PerformLayout() (ibidas.CyNetwork method) Pos() (ibidas.representor.Representor method) (in module ibidas) Power() (in module ibidas)

Pre (class in ibidas.pre) Prod() (ibidas.representor.Representor method) (in module ibidas)

R

Rank() (ibidas.representor.Representor method) (in module ibidas) Read() (in module ibidas) Redim() (ibidas.representor.Representor method) register() (ibidas.pre.Pre method) Rename() (ibidas.representor.Representor method)

Rep() (in module ibidas) Replace() (ibidas.representor.Representor method) ReplaceMissing() (ibidas.representor.Representor method) Representor (class in ibidas.representor)

S

Save() (in module ibidas) SelEdges() (ibidas.CyNetwork method) SelNodes() (ibidas.CyNetwork method) Serve() (in module ibidas) Set() (ibidas.representor.Representor method) SetNodeLabel() (ibidas.CyNetwork method) Shape() (ibidas.representor.Representor method) Show() (ibidas.representor.Representor method) Slices (ibidas.representor.Representor attribute)

Sort() (ibidas.representor.Representor method) SplitDim() (ibidas.representor.Representor method) SplitOnPattern() (ibidas.representor.Representor method) (in module ibidas) Sqrt() (in module ibidas) Std() (ibidas.representor.Representor method) string_interaction_types() (in module ibidas.pre) string_interactions() (in module ibidas.pre) Subtract() (in module ibidas) Sum() (ibidas.representor.Representor method) (in module ibidas)

T

TakeFrom() (ibidas.representor.Representor method) To() (ibidas.representor.Representor method) toDefval() (ibidas.itypes.rtypes.Type method) toMissingval() (ibidas.itypes.rtypes.Type method) toNumpy() (ibidas.itypes.rtypes.Type method)

ToPython() (ibidas.representor.Representor method) toScalar() (ibidas.itypes.rtypes.Type method) Transpose() (ibidas.representor.Representor method) Tuple() (ibidas.representor.Representor method) (in module ibidas) Type (class in ibidas.itypes.rtypes) (ibidas.representor.Representor attribute)

U

Union() (ibidas.representor.Representor method) Unique() (ibidas.representor.Representor method)

Unpack() (in module ibidas) Upper() (ibidas.representor.Representor method) (in module ibidas)

W

Without() (ibidas.representor.Representor method)

X

Xor() (in module ibidas)

Y

yeast_aliases() (in module ibidas.pre) yeast_chipchip() (in module ibidas.pre) yeast_collins_genetic() (in module ibidas.pre) yeast_collins_physical() (in module ibidas.pre)

yeast_feats() (in module ibidas.pre) yeast_kinome() (in module ibidas.pre) yeast_phosphogrid() (in module ibidas.pre) yeastract() (in module ibidas.pre)