Pyteomics documentation v3.4.2

How to install Pyteomics

«  Introduction   ::   Contents   ::   Peptide sequence formats. Parser module  »

How to install Pyteomics

Supported Python versions

Pyteomics supports Python 2.7 and Python 3.3+.

Project dependencies

Pyteomics uses the following Python packages:

All dependencies are optional.

GNU/Linux

The preferred way to obtain Pyteomics is via pip Python package manager. The shell code for a freshly installed Ubuntu system:

sudo apt-get install python-setuptools python-dev build-essential
sudo easy_install pip
sudo pip install lxml numpy matplotlib pyteomics

Arch-based distros

On Arch Linux and related distros, you can install Pyteomics from AUR:

Windows

  • Get pip, if you don’t have it yet.

  • Install Pyteomics and its dependencies:

    pip install lxml numpy matplotlib pyteomics
    

«  Introduction   ::   Contents   ::   Peptide sequence formats. Parser module  »