Index

_

__getitem__() (BaseMaskCache method)

A

activation (ExtractorData attribute) ACTIVATION_DTYPE (in module glimpse.backends) AllLayers() (glimpse.models.base.Layer class method) (glimpse.models.base.layer.Layer class method) (glimpse.models.ml.Layer class method) AnnotateBestPrototypeMatch() (in module glimpse.experiment)

AnnotateC1Activity() (in module glimpse.experiment) (in module glimpse.glab.api) AnnotateImprintedPrototype() (in module glimpse.experiment) (in module glimpse.glab.api) AnnotateS1Activity() (in module glimpse.experiment) (in module glimpse.glab.api) AnnotateS2Activity() (in module glimpse.experiment) (in module glimpse.glab.api)

B

BackendError BalanceCorpus() (in module glimpse.experiment) base_weight (OMWKmeansAlg attribute) BaseBackend (class in glimpse.backends.base_backend) BaseMaskCache (class in glimpse.experiment.om_wkmeans) BuildC1() (Model method)

BuildC2() (Model method) BuildLayer() (in module glimpse.models.base) BuildRetina() (Model method) BuildS1() (Model method) BuildS2() (Model method)

C

C1 (Layer attribute), [1] C2 (Layer attribute), [1] class_names (CorpusData attribute) ComputeActivation() (in module glimpse.experiment) (in module glimpse.glab.api) ContrastEnhance() (IBackend method)

corpus (ExperimentData attribute) CorpusData (class in glimpse.experiment) CreateImage() (InputSource method) CrossValidateClassifier() (in module glimpse.experiment)

D

DEFAULT_BACKEND_NAME (in module glimpse.backends) DEFAULT_CLUSTER_TYPE (in module glimpse.pools) DEFAULT_LAYER (in module glimpse.glab.api) DEFAULT_MODEL_NAME (in module glimpse.models)

DEFAULT_POOL_TYPE (in module glimpse.pools) DirReader (class in glimpse.experiment) DotProduct() (IBackend method)

E

environment variable GLIMPSE_MODEL EvaluateClassifier() (in module glimpse.glab.api) evaluation (ExperimentData attribute) EvaluationData (class in glimpse.experiment) ExperimentData (class in glimpse.experiment)

ExpError ExtractFeatures() (in module glimpse.experiment) ExtractHistogramFeatures() (in module glimpse.experiment) extractor (ExperimentData attribute) ExtractorData (class in glimpse.experiment)

F

FromId() (glimpse.models.base.Layer class method) (glimpse.models.base.layer.Layer class method) (glimpse.models.ml.Layer class method) FromImage() (in module glimpse.models.base.layer)

FromName() (glimpse.models.base.Layer class method) (glimpse.models.base.layer.Layer class method) (glimpse.models.ml.Layer class method)

G

get_mask_path() (MaskCache method) GetAlgorithmNames() (in module glimpse.experiment) GetBestPrototypeMatch() (in module glimpse.experiment) GetClusterPackage() (in module glimpse.pools) GetCorpusByName() (in module glimpse.experiment) GetEvaluationLayers() (in module glimpse.experiment) (in module glimpse.glab.api) GetEvaluationResults() (in module glimpse.experiment) (in module glimpse.glab.api) GetExperiment() (in module glimpse.glab.api) GetFeatures() (in module glimpse.glab.api) GetImageActivity() (in module glimpse.experiment) GetImagePatchForImprintedPrototype() (in module glimpse.experiment) GetImagePaths() (in module glimpse.experiment) (in module glimpse.glab.api) GetImprintLocation() (in module glimpse.experiment) (in module glimpse.glab.api) GetLabelNames() (in module glimpse.experiment) (in module glimpse.glab.api) GetMetaFeatures() (in module glimpse.experiment.mf_wkmeans) GetModel() (in module glimpse.glab.api) GetModelClass() (in module glimpse.models) GetNumPrototypes() (in module glimpse.experiment) (in module glimpse.glab.api) GetParams() (in module glimpse.experiment) (in module glimpse.glab.api) GetPredictions() (in module glimpse.experiment) (in module glimpse.glab.api)

GetPrototype() (in module glimpse.experiment) (in module glimpse.glab.api) GetS2ReceptiveField() (in module glimpse.models.ml) GetTrainingSet() (in module glimpse.experiment) glimpse.backends (module) glimpse.backends.base_backend (module) glimpse.backends.scipy_backend (module) glimpse.experiment (module) glimpse.experiment.mf_wkmeans (module) glimpse.experiment.om_wkmeans (module) glimpse.glab.api (module) glimpse.glab.cli (module) glimpse.models (module) glimpse.models.base (module) glimpse.models.base.layer (module) glimpse.models.ml (module) glimpse.pools (module) glimpse.pools.ipythoncluster (module) glimpse.prototypes (module) GLIMPSE_MODEL GlobalMax() (IBackend method)

H

high (UniformAlg attribute)

Histogram() (in module glimpse.prototypes)

I

IBackend (class in glimpse.backends) Ica() (in module glimpse.prototypes) ignore_hidden (DirReader attribute) IMAGE (Layer attribute) image_path (InputSource attribute) ImprintAlg (class in glimpse.experiment) ImprintS2Prototypes() (in module glimpse.glab.api)

InputLoadError (class in glimpse.backends) InputMapShapeForOutput() (IBackend method) InputSizeError InputSource (class in glimpse.backends) IPythonPool (class in glimpse.pools.ipythoncluster) IsSublayer() (glimpse.models.base.Layer class method) (glimpse.models.base.layer.Layer class method) (glimpse.models.ml.Layer class method)

K

Kmeans() (in module glimpse.prototypes) KmeansAlg (class in glimpse.experiment)

Kmedoids() (in module glimpse.prototypes)

L

labels (CorpusData attribute) layer (BackendError attribute) Layer (class in glimpse.models.base) (class in glimpse.models.base.layer) (class in glimpse.models.ml) LayerClass (Model attribute), [1] layers (EvaluationData attribute) LayerSpec (class in glimpse.models.base)

LearnPatchesFromImages() (in module glimpse.experiment.mf_wkmeans) (in module glimpse.experiment.om_wkmeans) LoadExperiment() (in module glimpse.glab.api) LoadParams() (in module glimpse.glab.api) LocalMax() (IBackend method) locations (ImprintAlg attribute) low (UniformAlg attribute)

M

MakeBackend() (in module glimpse.backends) MakeHistogramRandomS2Prototypes() (in module glimpse.glab.api) MakeKmeansS2Prototypes() (in module glimpse.glab.api) MakeModel() (in module glimpse.models) MakeNormalRandomS2Prototypes() (in module glimpse.glab.api) MakeParams() (in module glimpse.models) MakePool() (in module glimpse.pools) (in module glimpse.pools.ipythoncluster) MakePrototypes() (in module glimpse.experiment) MakeShuffledRandomS2Prototypes() (in module glimpse.glab.api) MakeState() (Model method), [1]

MakeUniformRandomS2Prototypes() (in module glimpse.glab.api) map() (IPythonPool method) (MulticorePool method) (SinglecorePool method) mask_dir (OMWKmeansAlg attribute) MaskCache (class in glimpse.experiment.om_wkmeans) MFWKmeansAlg (class in glimpse.experiment) MinimumRetinaSize() (in module glimpse.models.ml) Model (class in glimpse.models.base) (class in glimpse.models.ml) model (ExtractorData attribute) ModelClass (State attribute), [1] MulticorePool (class in glimpse.pools)

N

name (LayerSpec attribute) NearestKmeans() (in module glimpse.prototypes) Nmf() (in module glimpse.prototypes) NormalRandom() (in module glimpse.prototypes)

NormDotProduct() (IBackend method) NormRbf() (IBackend method) num_regr_samples (MFWKmeansAlg attribute) NumScalesSupported() (in module glimpse.models.ml)

O

OMWKmeansAlg (class in glimpse.experiment)

OutputMapShapeForInput() (IBackend method)

P

ParamClass (Model attribute), [1] Params (class in glimpse.models.base) (class in glimpse.models.ml) params (ExtractorData attribute) paths (CorpusData attribute) Pca() (in module glimpse.prototypes)

PlotS2ReceptiveField() (in module glimpse.models.ml) PrepareArray() (IBackend method) PrepareImage() (in module glimpse.models.base) PrototypeFGRatio() (in module glimpse.experiment.om_wkmeans)

R

Rbf() (IBackend method) ReadCorpusDirs() (in module glimpse.experiment) ReadDirs() (DirReader method) ReadFiles() (DirReader method) Register() (Model method), [1]

Reset() (in module glimpse.glab.api) ResolveLayers() (in module glimpse.experiment) results (EvaluationData attribute) RETINA (Layer attribute), [1]

S

S1 (Layer attribute), [1] s1_kernel_shape (Params attribute) s1_kernels (Model attribute) s1_kernels_are_normed (Params attribute) S2 (Layer attribute), [1] s2_kernel_shapes (Params attribute) s2_kernel_widths (Params attribute) s2_kernels (Model attribute) s2_kernels_are_normed (Params attribute) SampleAndLearnPatches() (in module glimpse.prototypes) SamplePatches() (in module glimpse.models.base) SamplePatchesFromData() (in module glimpse.models.base) SamplePatchesFromImages() (in module glimpse.prototypes) scale (BackendError attribute) ScipyBackend (class in glimpse.backends.scipy_backend) SetCorpus() (in module glimpse.experiment) (in module glimpse.glab.api) SetCorpusByName() (in module glimpse.glab.api) SetCorpusSplit() (in module glimpse.experiment) (in module glimpse.glab.api) SetCorpusSubdirs() (in module glimpse.experiment) (in module glimpse.glab.api)

SetLayer() (in module glimpse.glab.api) SetModel() (in module glimpse.experiment) SetParams() (in module glimpse.glab.api) SetParamsWithGui() (in module glimpse.glab.api) SetS2Prototypes() (in module glimpse.glab.api) ShowC1Activity() (in module glimpse.experiment) ShowPrototype() (in module glimpse.experiment) (in module glimpse.glab.api) ShowS1Activity() (in module glimpse.experiment) ShowS1Kernels() (in module glimpse.experiment) (in module glimpse.glab.api) ShowS2Activity() (in module glimpse.experiment) (in module glimpse.glab.api) ShuffledAlg (class in glimpse.experiment) SinglecorePool (class in glimpse.pools) source (BackendError attribute) (InputLoadError attribute) SOURCE (Layer attribute) SparsePca() (in module glimpse.prototypes) State (class in glimpse.models.base) (class in glimpse.models.ml) StateClass (Model attribute), [1] StoreExperiment() (in module glimpse.glab.api)

T

ToImage() (in module glimpse.models.base.layer) TopLayer() (glimpse.models.base.Layer class method) (glimpse.models.base.layer.Layer class method) (glimpse.models.ml.Layer class method) TrainAndTestClassifier() (in module glimpse.experiment)

training_set (CorpusData attribute) (EvaluationData attribute) (ExtractorData attribute) TrainQualityModel() (in module glimpse.experiment.mf_wkmeans)

U

UniformAlg (class in glimpse.experiment)

UniformRandom() (in module glimpse.prototypes)

V

Verbose() (in module glimpse.experiment) (in module glimpse.glab.api)

W

Whiten() (in module glimpse.models.ml)