Welcome to GalaxyGetOpt’s documentation!

Contents:

• GalaxyGetOpt Quickstart
• Creating Parameters
  • Zero/One Item Lists
  • Two Item Lists
  • Three Item Lists
• “Defaults”
• Documenting Tools
  • In Galaxy
  • At the Command Line
• Output Files
  • Output Formats
    • Plain Text
    • Tabular Data
  • Multiple Output Files
    • Separate History Items
    • Single History Item
• Test Cases
  • In Galaxy
  • At the Command Line

Indices and tables

• Index
• Module Index
• Search Page