Index

A

a (apgl.util.Parameter attribute) add() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) addChild() (apgl.graph.DictTree.DictTree method) addEdge() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.DictGraph.DictGraph method) (apgl.graph.DictTree.DictTree method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method)

addEdges() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.DictGraph.DictGraph method) (apgl.graph.DictTree.DictTree method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) adjacencies (apgl.graph.DictGraph.DictGraph attribute) (apgl.graph.DictTree.DictTree attribute) adjacencyList() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.DictGraph.DictGraph method) (apgl.graph.DictTree.DictTree method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) adjacencyMatrix() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method)

B

b (apgl.util.Parameter attribute) BarabasiAlbertGenerator (class in apgl.generator.BarabasiAlbertGenerator) betweenness() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method)

bootstrap() (apgl.util.Sampling static method) bootstrap2() (apgl.util.Sampling static method) breadthFirstSearch() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.DictGraph.DictGraph method) (apgl.graph.DictTree.DictTree method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method)

C

checkArray() (apgl.util.Parameter static method) checkBoolean() (apgl.util.Parameter static method) checkClass() (apgl.util.Parameter static method) checkFloat() (apgl.util.Parameter static method) checkIndex() (apgl.util.Parameter static method) checkInt() (apgl.util.Parameter static method) checkList() (apgl.util.Parameter static method) checkOrthogonal() (apgl.util.Parameter static method) checkString() (apgl.util.Parameter static method) checkSymmetric() (apgl.util.Parameter static method)

children() (apgl.graph.DictTree.DictTree method) clearVertex() (apgl.graph.GeneralVertexList.GeneralVertexList method) (apgl.graph.VertexList.VertexList method) clusteringCoefficient() (apgl.generator.ErdosRenyiGenerator.ErdosRenyiGenerator method) (apgl.generator.SmallWorldGenerator.SmallWorldGenerator method) (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) complement() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) concat() (apgl.graph.SparseGraph.SparseGraph method) ConfigModelGenerator (class in apgl.generator.ConfigModelGenerator) copy() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.DictTree.DictTree method) (apgl.graph.GeneralVertexList.GeneralVertexList method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) (apgl.graph.VertexList.VertexList method) crossValidation() (apgl.util.Sampling static method) cut() (apgl.graph.DictTree.DictTree method)

D

deepCopy() (apgl.graph.DictTree.DictTree method) degreeDistribution() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) degreeSequence() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.DictGraph.DictGraph method) (apgl.graph.DictTree.DictTree method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) DenseGraph (class in apgl.graph.DenseGraph) density() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.DictGraph.DictGraph method) (apgl.graph.DictTree.DictTree method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) depth() (apgl.graph.DictTree.DictTree method)

depthFirstSearch() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.DictGraph.DictGraph method) (apgl.graph.DictTree.DictTree method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) diameter() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) diameter2() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) DictGraph (class in apgl.graph.DictGraph) DictTree (class in apgl.graph.DictTree) dijkstrasAlgorithm() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.DictGraph.DictGraph method) (apgl.graph.DictTree.DictTree method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method)

E

edgeExists() (apgl.graph.DictGraph.DictGraph method) (apgl.graph.DictTree.DictTree method) effectiveDiameter() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) egoGraph() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method)

ErdosRenyiGenerator (class in apgl.generator.ErdosRenyiGenerator) evaluate() (apgl.kernel.GaussianKernel method) (apgl.kernel.LinearKernel method) (apgl.kernel.PolyKernel method) ext (apgl.graph.GeneralVertexList.GeneralVertexList attribute) (apgl.graph.VertexList.VertexList attribute)

F

findAllDistances() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.DictGraph.DictGraph method) (apgl.graph.DictTree.DictTree method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) findConnectedComponents() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.DictGraph.DictGraph method) (apgl.graph.DictTree.DictTree method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) findTrees() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) fitPowerLaw() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method)

floatTypes (apgl.util.Parameter attribute) floydWarshall() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) fromNetworkXGraph() (apgl.graph.DenseGraph.DenseGraph class method) (apgl.graph.PySparseGraph.PySparseGraph class method) (apgl.graph.SparseGraph.SparseGraph class method)

G

GaussianKernel (class in apgl.kernel) GeneralVertexList (class in apgl.graph.GeneralVertexList) generate() (apgl.generator.BarabasiAlbertGenerator.BarabasiAlbertGenerator method) (apgl.generator.ConfigModelGenerator.ConfigModelGenerator method) (apgl.generator.ErdosRenyiGenerator.ErdosRenyiGenerator method) (apgl.generator.KroneckerGenerator.KroneckerGenerator method) (apgl.generator.SmallWorldGenerator.SmallWorldGenerator method) generate2() (apgl.generator.ErdosRenyiGenerator.ErdosRenyiGenerator method) geodesicDistance() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) getAllDirEdges() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) getAllEdgeIndices() (apgl.graph.DictGraph.DictGraph method) (apgl.graph.DictTree.DictTree method) getAllEdges() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.DictGraph.DictGraph method) (apgl.graph.DictTree.DictTree method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) getAllVertexIds() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.DictGraph.DictGraph method) (apgl.graph.DictTree.DictTree method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) getEdge() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.DictGraph.DictGraph method) (apgl.graph.DictTree.DictTree method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) getEdgeValues() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) getFeatureDistribution() (apgl.graph.VertexList.VertexList method) getInDegSequence() (apgl.generator.ConfigModelGenerator.ConfigModelGenerator method)

getK() (apgl.features.PrimalPCA method) getNumDirEdges() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.DictGraph.DictGraph method) (apgl.graph.DictTree.DictTree method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) getNumEdges() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.DictGraph.DictGraph method) (apgl.graph.DictTree.DictTree method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) getNumFeatures() (apgl.graph.VertexList.VertexList method) getNumVertices() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.DictGraph.DictGraph method) (apgl.graph.DictTree.DictTree method) (apgl.graph.GeneralVertexList.GeneralVertexList method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) (apgl.graph.VertexList.VertexList method) getOutDegSequence() (apgl.generator.ConfigModelGenerator.ConfigModelGenerator method) getRoot() (apgl.graph.DictTree.DictTree method) getRootId() (apgl.graph.DictTree.DictTree method) getSparseWeightMatrix() (apgl.graph.DictGraph.DictGraph method) (apgl.graph.DictTree.DictTree method) (apgl.graph.SparseGraph.SparseGraph method) getVertex() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.DictGraph.DictGraph method) (apgl.graph.DictTree.DictTree method) (apgl.graph.GeneralVertexList.GeneralVertexList method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) (apgl.graph.VertexList.VertexList method) getVertexList() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) getVertices() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.DictGraph.DictGraph method) (apgl.graph.DictTree.DictTree method) (apgl.graph.GeneralVertexList.GeneralVertexList method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) (apgl.graph.VertexList.VertexList method) getWeightMatrix() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.DictGraph.DictGraph method) (apgl.graph.DictTree.DictTree method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method)

H

harmonicGeodesicDistance() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method)

hopCount() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method)

I

incidenceMatrix() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) inDegreeDistribution() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) inDegreeSequence() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.DictGraph.DictGraph method) (apgl.graph.DictTree.DictTree method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) intersect() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) intTypes (apgl.util.Parameter attribute)

isLeaf() (apgl.graph.DictTree.DictTree method) isNonLeaf() (apgl.graph.DictTree.DictTree method) isSubtree() (apgl.graph.DictTree.DictTree method) isTree() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) isUndirected() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.DictGraph.DictGraph method) (apgl.graph.DictTree.DictTree method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method)

K

KernelCCA (class in apgl.features)

KroneckerGenerator (class in apgl.generator.KroneckerGenerator)

L

laplacianMatrix() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) laplacianWeightMatrix() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) learnModel() (apgl.features.KernelCCA method) (apgl.features.PrimalCCA method) (apgl.features.PrimalPCA method) leaves() (apgl.graph.DictTree.DictTree method)

LinearKernel (class in apgl.kernel) load() (apgl.graph.DenseGraph.DenseGraph class method) (apgl.graph.GeneralVertexList.GeneralVertexList static method) (apgl.graph.PySparseGraph.PySparseGraph class method) (apgl.graph.SparseGraph.SparseGraph class method) (apgl.graph.VertexList.VertexList static method) loadMatrix() (apgl.graph.DenseGraph.DenseGraph static method) (apgl.graph.PySparseGraph.PySparseGraph static method) (apgl.graph.SparseGraph.SparseGraph static method)

M

maxEigenvector() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) maxProductPaths() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method)

maybeIsomorphicWith() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) multiply() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method)

N

nativeAdjacencyMatrix() (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) neighbourOf() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.DictGraph.DictGraph method) (apgl.graph.DictTree.DictTree method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) neighbours() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.DictGraph.DictGraph method) (apgl.graph.DictTree.DictTree method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method)

nonLeaves() (apgl.graph.DictTree.DictTree method) normalisedLaplacianRw() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) normalisedLaplacianSym() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method)

O

outDegreeSequence() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.DictGraph.DictGraph method) (apgl.graph.DictTree.DictTree method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method)

P

Parameter (class in apgl.util) PolyKernel (class in apgl.kernel) PrimalCCA (class in apgl.features) PrimalPCA (class in apgl.features)

project() (apgl.features.KernelCCA method) (apgl.features.PrimalCCA method) (apgl.features.PrimalPCA method) pruneVertex() (apgl.graph.DictTree.DictTree method) PySparseGraph (class in apgl.graph.PySparseGraph)

R

readFromFile() (apgl.io.SimpleGraphReader method) removeAllEdges() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) removeEdge() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.DictGraph.DictGraph method) (apgl.graph.DictTree.DictTree method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) removeEdges() (apgl.graph.DictTree.DictTree method)

removeVertex() (apgl.graph.DictGraph.DictGraph method) (apgl.graph.DictTree.DictTree method) repCrossValidation() (apgl.util.Sampling static method) replaceVertices() (apgl.graph.VertexList.VertexList method)

S

Sampling (class in apgl.util) save() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.GeneralVertexList.GeneralVertexList method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) (apgl.graph.VertexList.VertexList method) saveMatrix() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) setB() (apgl.kernel.PolyKernel method) setDegree() (apgl.kernel.PolyKernel method) setDiff() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) setEll() (apgl.generator.BarabasiAlbertGenerator.BarabasiAlbertGenerator method) setInDegSequence() (apgl.generator.ConfigModelGenerator.ConfigModelGenerator method) setK() (apgl.features.PrimalPCA method) (apgl.generator.KroneckerGenerator.KroneckerGenerator method) (apgl.generator.SmallWorldGenerator.SmallWorldGenerator method) setM() (apgl.generator.BarabasiAlbertGenerator.BarabasiAlbertGenerator method) setOutDegSequence() (apgl.generator.ConfigModelGenerator.ConfigModelGenerator method) setP() (apgl.generator.ErdosRenyiGenerator.ErdosRenyiGenerator method) (apgl.generator.SmallWorldGenerator.SmallWorldGenerator method) setSelfEdges() (apgl.generator.ErdosRenyiGenerator.ErdosRenyiGenerator method) setSigma() (apgl.kernel.GaussianKernel method) setVertex() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.DictGraph.DictGraph method) (apgl.graph.DictTree.DictTree method) (apgl.graph.GeneralVertexList.GeneralVertexList method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) (apgl.graph.VertexList.VertexList method)

setVertexList() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) setVertices() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.DictGraph.DictGraph method) (apgl.graph.DictTree.DictTree method) (apgl.graph.GeneralVertexList.GeneralVertexList method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) (apgl.graph.VertexList.VertexList method) setWeightMatrix() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) setWeightMatrixSparse() (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) shuffleSplit() (apgl.util.Sampling static method) SimpleGraphReader (class in apgl.io) SimpleGraphWriter (class in apgl.io) size (apgl.graph.DenseGraph.DenseGraph attribute) (apgl.graph.DictGraph.DictGraph attribute) (apgl.graph.DictTree.DictTree attribute) (apgl.graph.PySparseGraph.PySparseGraph attribute) (apgl.graph.SparseGraph.SparseGraph attribute) SmallWorldGenerator (class in apgl.generator.SmallWorldGenerator) SparseGraph (class in apgl.graph.SparseGraph) subgraph() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.DictGraph.DictGraph method) (apgl.graph.DictTree.DictTree method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) subList() (apgl.graph.GeneralVertexList.GeneralVertexList method) (apgl.graph.VertexList.VertexList method) subtreeAt() (apgl.graph.DictTree.DictTree method) subtreeIds() (apgl.graph.DictTree.DictTree method)

T

toCsc() (apgl.graph.SparseGraph.SparseGraph method) toCsr() (apgl.graph.SparseGraph.SparseGraph method) toDictGraph() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) toIGraph() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.DictGraph.DictGraph method) (apgl.graph.DictTree.DictTree method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method)

toNetworkXGraph() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.DictGraph.DictGraph method) (apgl.graph.DictTree.DictTree method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method) toPySparseGraph() (apgl.graph.DictGraph.DictGraph method) (apgl.graph.DictTree.DictTree method) toSparseGraph() (apgl.graph.DictGraph.DictGraph method) (apgl.graph.DictTree.DictTree method) triangleSequence() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method)

U

undirected (apgl.graph.DenseGraph.DenseGraph attribute) (apgl.graph.DictGraph.DictGraph attribute) (apgl.graph.DictTree.DictTree attribute) (apgl.graph.PySparseGraph.PySparseGraph attribute) (apgl.graph.SparseGraph.SparseGraph attribute)

union() (apgl.graph.DenseGraph.DenseGraph method) (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method)

V

V (apgl.graph.GeneralVertexList.GeneralVertexList attribute) (apgl.graph.VertexList.VertexList attribute) vertexExists() (apgl.graph.DictGraph.DictGraph method) (apgl.graph.DictTree.DictTree method) VertexList (class in apgl.graph.VertexList) vertices (apgl.graph.DictGraph.DictGraph attribute) (apgl.graph.DictTree.DictTree attribute) vList (apgl.graph.DenseGraph.DenseGraph attribute)

vlist (apgl.graph.DenseGraph.DenseGraph attribute) (apgl.graph.PySparseGraph.PySparseGraph attribute) vList (apgl.graph.PySparseGraph.PySparseGraph attribute) vlist (apgl.graph.SparseGraph.SparseGraph attribute) vList (apgl.graph.SparseGraph.SparseGraph attribute)

W

W (apgl.graph.DenseGraph.DenseGraph attribute) (apgl.graph.SparseGraph.SparseGraph attribute) weightMatrixDType() (apgl.graph.DenseGraph.DenseGraph method) weightMatrixType() (apgl.graph.PySparseGraph.PySparseGraph method) (apgl.graph.SparseGraph.SparseGraph method)

whatToDo() (apgl.util.Parameter static method) writeToFile() (apgl.io.SimpleGraphWriter method)